Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015822353.1_cds_XP_016501074.1_14844
CDS Infomation

[gene=LOC107819485] [db_xref=GeneID:107819485] [protein=probable galacturonosyltransferase 11 isoform X2] [protein_id=XP_016501074.1] [location=80661..82016] [gbkey=CDS]
Sequence

ATGACATTAGCCAAAGCTTATATTGTTATTGCAAAAGAGCACAACAACCTTCATCTTGCT
TGGGAGCTAAGTTCAAAGATAAGAAGTTGTCAACTTTTACTATCAAAGGCTGCAATGAAG
GAAGAGCCTATTTCTCTGGATGAAGCAGAACCAATAATAAAAAGTCTATCTTCTCTTATC
TCTAAGCCACAAGATGCGCACTATGATATTGCAACCACTATGATGACAATGAAATCACAC
ATTCAAGCTCTAGAGGAGCGTGCTAATGCCGCGTCTGTCCAAAGTATGATGTTTGGACAG
TTAACAGCTGAGTCCCTGCCCAAGAACCTACACTGCCTAGAAATCAAACTCATGTCCGAT
TGGCTTACAAGAAAGTCGCTGCAGGATTTTGCTGATGAGAGGAGAAACTCCCCTAGATTA
GTGGACAATAATTTGTATCACTTCTGCATATTTTCAGATAATCTGTTGGCAGTTTCAGCA
GTTGTTAACTCAACGATGTCCAATGCTGATCACCCTAAGCAGCTTGTGTTCCATATTGTA
ACAGATGTGATACACTACGGAATGATGCAGGCTTGGTTCTTAAATAATGACTTCAAAGGT
TCTACAGTAGAAGTGCAGAATATTGAAGACTTGACTTGGTTGAATTCATCTTATTCTCCA
GCTTTAAAGCAGCTTAGAGAAGCAGACTCCAGGAAGTATTACTTTGATGGGTCTGAGGAC
GCAAGTATTGAGCCAAAGTTCCGGAATCCAAAGTATATATCTGTGTTGAATCACCTTCGG
TTTTACATACCTGAGATCTATCCCCAGTTAGAGAAGATAGTCTTTCTTGACGATGATGTG
GTAGTGCAGAAAGATCTGACACCTCTCTTTTCGTTGGATTTGCACGGGAACGTGAATGGA
GCAGTGGAAACTTGTCTTGAAGCTTTTCATCGGTATTACAAGTATCTCAATTTCTCAAAT
CCACTCATCAGCTCAAGGTTTGATCCTCAAGCATGTGGGTGGGCATTTGGTATGAATGTT
TTTGATTTGATGGCGTGGAGGAAAGCAAATGTTACGGCGCGATATCATTACTGGCTAGAA
CAAAATGCCGATAGGACGCTTTGGAAGCTGGGTACCCTTCCACCAGGATTATTAGCTTTT
TATGGATTGACGGAGCCGCTTGATAGGAGATGGCATGTCTTAGGATTAGGTTATGACCTT
AACGTTGACAGTCGCCTCATAGAGAGTGCAGCAGTAGTTCATTTCAATGGGAACATGAAG
CCATGGCTTAAGTTGGGCATTAGCAAGTATAGACCTTTGTGGGAACGGTATGTAAATCAG
ACACACCCATACCTTCGGGATTGCGCCACACATTGA

Peptide Sequence

PEP ID

XP_016501074.1
PEP Infomation

PREDICTED: probable galacturonosyltransferase 11 isoform X2 [Nicotiana tabacum]
Sequence

MTLAKAYIVIAKEHNNLHLAWELSSKIRSCQLLLSKAAMKEEPISLDEAEPIIKSLSSLI
SKPQDAHYDIATTMMTMKSHIQALEERANAASVQSMMFGQLTAESLPKNLHCLEIKLMSD
WLTRKSLQDFADERRNSPRLVDNNLYHFCIFSDNLLAVSAVVNSTMSNADHPKQLVFHIV
TDVIHYGMMQAWFLNNDFKGSTVEVQNIEDLTWLNSSYSPALKQLREADSRKYYFDGSED
ASIEPKFRNPKYISVLNHLRFYIPEIYPQLEKIVFLDDDVVVQKDLTPLFSLDLHGNVNG
AVETCLEAFHRYYKYLNFSNPLISSRFDPQACGWAFGMNVFDLMAWRKANVTARYHYWLE
QNADRTLWKLGTLPPGLLAFYGLTEPLDRRWHVLGLGYDLNVDSRLIESAAVVHFNGNMK
PWLKLGISKYRPLWERYVNQTHPYLRDCATH

Transcript Sequence

Gene sequence data has not been registered.